Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826601.1_cds_XP_016502716.1_16326
CDS Infomation

[gene=LOC107820875] [db_xref=GeneID:107820875] [protein=vacuolar-processing enzyme-like] [protein_id=XP_016502716.1] [location=join(65930..66127,66644..66808,66892..67048,67657..67742,67887..68086,68326..68374,68663..68872,69817..70023,70236..70418)] [gbkey=CDS]
Sequence

ATGATTGTTCGCTACGTTGTGAGTGCTGTCTTGATCATTGGACTGTCAATTCTCGCCGCC
GTTGACGGCAGGGATGTGCTGAAATTACCGTCGGAAGCATTAAAGTTTTTCAGTGGTGAG
TACGATGATGATTCAATTGGTACTAAATGGGCTGTGCTGGTTGCTGGATCAAGAGGTTGC
TGGAATTACAGGCACCAGGCAGATGTTTGTCACGCATATCAGCTGTTGAAGAAAGGTGGC
CTCAAGGATGAAAATATTATTGTGTTTATGTATGATGACATTGCTCATAATCCTGAGAAT
CCTAGGCCAGGAGTCATCATAAATAGCCCTAATGGTCATGATGTCTATAAAGGAGTTCCA
AAGGATTATACAGGGCATCATGTTACAGCCAACAACGTTCTTGCTGTTATCCTTGGGAAC
AAAAGCGCTCTTAGTGGAGGCAGTGGGAAGGTGGTGGAAAGTGGTCCGAATGATCATATC
TTCATCTTCTACAGTGATCATGGTGGTCCTGGAGTGCTTGGGATGCCTAGTGGCCCTTAT
CTCTATGCTGATGATTTAATTGATGCCTTGAAAAGGAAGCATGCTTCAGGGACATACAAA
CGCTTAGTCTTTTACATTGAGGCTTGTGAATCTGGGAGTATATTTGAGGGCCTTCTACCT
GAAGGTCTTAATATCTGTGCAACAACAGCATCAAATGCTGAAGAGGACAGTTGGGGAACC
TACTGTCCAGGAGACTATCCAGGTCCTCCTCCAGAATACCAGACCTGCTTGGGTGACTTG
TACGCTGTATCTTGGATGGAAGATAGTGAAAAACACAATCTCCAAAGAGAAACTTTAGGA
ATGCAATATGAGCTGGTTAAAAGGAGAACTGCCAACTCGTTTCCCTATGCAAGTTCCCAT
GTAATGCAATATGGTGATCTGAAGCTAATGGATGATCCTCTTTCCCTTTATATGGGGACC
AATCCCGCAAATGATAATTACACTTTTCTGGACGAGAATTCCTCACTGCTCTCTGCAAAG
CCTGTTAACCAACGTGATGCAGATCTTTTGCATTTCTGGGACAAGTTCCTCAAGGCTCCT
CAAGGTTCTATTAGGAAAATTGAAGCCCAGAAGCAGCTGACTGAAGCTATGTCACACAGA
ATGCACATAGACGACAGCATTGCACTTGTTGGGAAGCTTCTATTCGGAATTGAGAAAGGT
CCTGAGGTGCTGATTAGAGTCAGACCTACTGGCGAGCCTCTTGTTGATGATTGGGATTGT
CTTAAATCCTTTGTAAGAACATTTGAGACACATTGTGGATCATTATCCCAGTATGGAATG
AAACATATGCGTGCTGTTGCTAACATATGCAACTCTGGTATAAAAATGGAGCAGATAGCC
AAAGCATCAGCACAAGCTTGTGTGAGTATTCCTTCCAACTCTTGGAGTTCGCTCGACGAG
GGATTTAGTGCATAG

Peptide Sequence

PEP ID

XP_016502716.1
PEP Infomation

PREDICTED: vacuolar-processing enzyme-like [Nicotiana tabacum]
Sequence

MIVRYVVSAVLIIGLSILAAVDGRDVLKLPSEALKFFSGEYDDDSIGTKWAVLVAGSRGC
WNYRHQADVCHAYQLLKKGGLKDENIIVFMYDDIAHNPENPRPGVIINSPNGHDVYKGVP
KDYTGHHVTANNVLAVILGNKSALSGGSGKVVESGPNDHIFIFYSDHGGPGVLGMPSGPY
LYADDLIDALKRKHASGTYKRLVFYIEACESGSIFEGLLPEGLNICATTASNAEEDSWGT
YCPGDYPGPPPEYQTCLGDLYAVSWMEDSEKHNLQRETLGMQYELVKRRTANSFPYASSH
VMQYGDLKLMDDPLSLYMGTNPANDNYTFLDENSSLLSAKPVNQRDADLLHFWDKFLKAP
QGSIRKIEAQKQLTEAMSHRMHIDDSIALVGKLLFGIEKGPEVLIRVRPTGEPLVDDWDC
LKSFVRTFETHCGSLSQYGMKHMRAVANICNSGIKMEQIAKASAQACVSIPSNSWSSLDE
GFSA

Transcript Sequence

Gene sequence data has not been registered.